PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_023611-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 507aa    MW: 56915.6 Da    PI: 5.6499
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_023611-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.4e-14304350354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    + h + Er+RR+++N++f  Lr l+P++     +K + a+i+  A++YIk+L
  NNU_023611-RA 304 AHHFATERQRREQLNEKFKALRLLVPNP-----TKADRASIVGDAIDYIKEL 350
                    579*************************.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.66E-16299363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.685301350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.5E-11304350IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-14305358IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.98E-13305354No hitNo description
SMARTSM003531.1E-13307356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MYVETQYFDP HDPHQIPAAV SVDNPSQTVT DCSGLSPLMN SFQDNLRFSS SSSPEDIPDH  60
PNPSGDTSAS AIAASMGIDL QQQLGFEMEH ELNNHLMQDV LHDPAQTQFE QHNWNVGEQD  120
MSYRHEQPLP QQYQQYHDQD QHVGLQHNLH CLNSTPFQNP PYVATPDLLN LLQLPRCTVS  180
SMLPASSISF TNTSKKRPNY QTSLDIFGEL PTTDGTVAAT SLYDHPPLHL NLPPQPPLFR  240
ELFHLPQNYN LPGSRGGSFF GGLDEREVSC GVYQDGDDRQ FENSVLDFRR EMNGLGKGGE  300
ARGAHHFATE RQRREQLNEK FKALRLLVPN PTKADRASIV GDAIDYIKEL LRTVDELKIL  360
VEKKRCGRGG SKKLKTDDEA AGDMEGSSMK KHGTLTDREQ SFNGSLRSSW LQRKSKDTEV  420
DVRIIDDEVT IKLIQRKKVN CLLVVSKILD ELQLDLLHVA GGNIGDYYSF LFNTKIYEGS  480
SVYASAIAKK LIEVVDRQHA AFPPSNF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243136.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_010243137.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_010243138.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_010243139.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLF6I1S31e-152F6I1S3_VITVI; Putative uncharacterized protein
STRINGVIT_15s0107g00380.t011e-152(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-83bHLH family protein